PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC001023.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 127aa    MW: 14166.1 Da    PI: 7.2591
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC001023.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.0006712432054
                  HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  +++L++l       +s+ ++K +i   A++YI++L
  EcC001023.20 12 YQKLQQLRAAT---NSTAVNKTSIIVDATNYISKL 43
                  56666666666...8999***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.6E-5462IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-6655IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048732.06E-565122No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MSSRERKRAA LYQKLQQLRA ATNSTAVNKT SIIVDATNYI SKLKEKVERL NQEAGTSSPN  60
RLPMEVTVDT LDRGFRINVY SERNCPGLLV SILEAFEELG LNVLDARVSC SDNFHLEAVG  120
GEVSFLF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035983.18e-85PREDICTED: uncharacterized protein LOC104425093
TrEMBLA0A059A1399e-85A0A059A139_EUCGR; Uncharacterized protein
STRINGVIT_08s0058g00960.t015e-58(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.12e-08bHLH family protein